Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.53■□□□□ 0.72
USP38Q8NB14 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
USP38Q8NB14 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.53■□□□□ 0.72
USP38Q8NB14 NKAPP1-205ENST00000585790 367 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.53■□□□□ 0.72
USP38Q8NB14 AC011467.4-201ENST00000594891 528 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 AC106028.4-201ENST00000614509 607 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 AC008735.5-201ENST00000623544 497 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
USP38Q8NB14 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP38Q8NB14 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.52■□□□□ 0.72
USP38Q8NB14 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.52■□□□□ 0.72
USP38Q8NB14 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.52■□□□□ 0.72
USP38Q8NB14 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.52■□□□□ 0.72
USP38Q8NB14 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.52■□□□□ 0.72
USP38Q8NB14 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 MTDHP4-201ENST00000600287 670 ntBASIC19.52■□□□□ 0.72
USP38Q8NB14 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.52■□□□□ 0.72
USP38Q8NB14 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP38Q8NB14 AC107918.4-202ENST00000641623 219 ntBASIC19.52■□□□□ 0.72
USP38Q8NB14 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP38Q8NB14 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
USP38Q8NB14 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP38Q8NB14 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP38Q8NB14 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP38Q8NB14 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.52■□□□□ 0.71
USP38Q8NB14 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP38Q8NB14 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.51■□□□□ 0.71
USP38Q8NB14 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 DUTP2-201ENST00000519164 463 ntBASIC19.51■□□□□ 0.71
USP38Q8NB14 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.51■□□□□ 0.71
USP38Q8NB14 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.51■□□□□ 0.71
USP38Q8NB14 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.51■□□□□ 0.71
USP38Q8NB14 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP38Q8NB14 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP38Q8NB14 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP38Q8NB14 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP38Q8NB14 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP38Q8NB14 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
USP38Q8NB14 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.5■□□□□ 0.71
USP38Q8NB14 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.5■□□□□ 0.71
USP38Q8NB14 AC103564.2-201ENST00000432853 1299 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.5■□□□□ 0.71
USP38Q8NB14 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
USP38Q8NB14 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
USP38Q8NB14 SPCS2P1-201ENST00000561636 679 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 SNHG9-202ENST00000564014 471 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP38Q8NB14 MTDHP5-201ENST00000598980 586 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 AC093010.1-201ENST00000473625 1624 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 AC079776.2-201ENST00000641154 1609 ntBASIC19.5■□□□□ 0.71
USP38Q8NB14 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms