Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 DDX43P3-201ENST00000441064 443 ntBASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 KRT19P2-202ENST00000557173 1012 ntBASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 BCAR1-209ENST00000546196 1340 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 BX276092.7-203ENST00000637198 1536 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PTCHD3P3-201ENST00000403073 906 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AC074386.1-202ENST00000463561 864 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AL031432.2-201ENST00000566714 459 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AL928711.1-201ENST00000570165 459 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AC109462.3-201ENST00000573934 613 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 AC010507.1-201ENST00000633895 436 ntBASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPOQ8N3V7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 MIR770-201ENST00000390219 98 ntBASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 FAM8A3P-201ENST00000427218 844 ntBASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 AC023141.13-201ENST00000604991 943 ntBASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 AL353135.1-201ENST00000606729 504 ntBASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPOQ8N3V7 AC126763.1-201ENST00000552015 2118 ntBASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms