Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 LAGE3P1-201ENST00000425356 484 ntBASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 AC105339.3-201ENST00000560043 636 ntBASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 TERC-201ENST00000602385 541 ntBASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PHTF2Q8N3S3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHTF2Q8N3S3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 MIR940-201ENST00000401276 94 ntBASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 SPDYE21P-201ENST00000413323 827 ntBASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 Z83851.2-201ENST00000609564 659 ntBASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 AL022326.1-202ENST00000641533 845 ntBASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 AL096828.2-201ENST00000567259 1965 ntBASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.08■□□□□ 0.48
PHTF2Q8N3S3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC106820.2-201ENST00000563775 3264 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC022898.2-201ENST00000616822 1312 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC009053.2-201ENST00000563701 2365 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 KRT18P27-201ENST00000427733 1299 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 PRYP5-201ENST00000451909 266 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 AC140113.2-201ENST00000604370 208 ntBASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PHTF2Q8N3S3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms