Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC27.14■■□□□ 1.93
VPS8Q8N3P4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC27.14■■□□□ 1.93
VPS8Q8N3P4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
VPS8Q8N3P4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
VPS8Q8N3P4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
VPS8Q8N3P4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.12■■□□□ 1.93
VPS8Q8N3P4 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.12■■□□□ 1.93
VPS8Q8N3P4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 GGTLC5P-201ENST00000617623 998 ntBASIC27.12■■□□□ 1.93
VPS8Q8N3P4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC27.12■■□□□ 1.93
VPS8Q8N3P4 AC093525.9-201ENST00000624961 1746 ntBASIC27.11■■□□□ 1.93
VPS8Q8N3P4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 CYP51A1P2-201ENST00000419457 1499 ntBASIC27.11■■□□□ 1.93
VPS8Q8N3P4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS8Q8N3P4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 KRT18P2-201ENST00000447938 1258 ntBASIC27.1■■□□□ 1.93
VPS8Q8N3P4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 AC002310.6-201ENST00000624451 1377 ntBASIC27.1■■□□□ 1.93
VPS8Q8N3P4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS8Q8N3P4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 VN2R19P-201ENST00000442399 1052 ntBASIC27.09■■□□□ 1.93
VPS8Q8N3P4 KRT18P3-201ENST00000451602 1288 ntBASIC27.09■■□□□ 1.93
VPS8Q8N3P4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
VPS8Q8N3P4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
VPS8Q8N3P4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.08■■□□□ 1.93
VPS8Q8N3P4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.08■■□□□ 1.93
VPS8Q8N3P4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms