Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 AC046158.3-201ENST00000624947 2558 ntBASIC15.85■□□□□ 0.13
SHFQ7M4L6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 AC005915.1-201ENST00000624912 2018 ntBASIC15.85■□□□□ 0.13
SHFQ7M4L6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 KRT89P-201ENST00000620027 1478 ntBASIC15.84■□□□□ 0.13
SHFQ7M4L6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.84■□□□□ 0.13
SHFQ7M4L6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHFQ7M4L6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 LYSMD4-203ENST00000378904 2122 ntBASIC15.83■□□□□ 0.13
SHFQ7M4L6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 CICP6-201ENST00000457191 2729 ntBASIC15.83■□□□□ 0.13
SHFQ7M4L6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHFQ7M4L6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.83■□□□□ 0.13
SHFQ7M4L6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms