Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 MYCLP1-201ENST00000372451 1075 ntBASIC16.8■□□□□ 0.28
RNF44Q7L0R7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
RNF44Q7L0R7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 AC073592.4-201ENST00000623827 446 ntBASIC16.8■□□□□ 0.28
RNF44Q7L0R7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF44Q7L0R7 AC132938.5-201ENST00000624980 1813 ntBASIC16.8■□□□□ 0.28
RNF44Q7L0R7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AC079776.2-201ENST00000641154 1609 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AC003669.1-201ENST00000334569 611 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 SPDYE21P-201ENST00000413323 827 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AP002469.2-201ENST00000531724 424 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AL160237.2-201ENST00000556165 472 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 STK25P1-201ENST00000585406 838 ntBASIC16.79■□□□□ 0.28
RNF44Q7L0R7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF44Q7L0R7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.78■□□□□ 0.28
RNF44Q7L0R7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 AL356309.3-201ENST00000624132 1934 ntBASIC16.78■□□□□ 0.28
RNF44Q7L0R7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 KLF4P1-201ENST00000412782 1185 ntBASIC16.78■□□□□ 0.28
RNF44Q7L0R7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 SCARNA2-201ENST00000458748 420 ntBASIC16.78■□□□□ 0.28
RNF44Q7L0R7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF44Q7L0R7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF44Q7L0R7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF44Q7L0R7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF44Q7L0R7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms