Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.62■□□□□ 0.41
RAPH1Q70E73 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RAPH1Q70E73 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAPH1Q70E73 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SPDYE15P-201ENST00000424157 909 ntBASIC17.61■□□□□ 0.41
RAPH1Q70E73 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 AC112698.1-201ENST00000510299 916 ntBASIC17.61■□□□□ 0.41
RAPH1Q70E73 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 BX276092.7-203ENST00000637198 1536 ntBASIC17.61■□□□□ 0.41
RAPH1Q70E73 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.61■□□□□ 0.41
RAPH1Q70E73 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAPH1Q70E73 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 UBALD1-205ENST00000590891 2641 ntBASIC17.6■□□□□ 0.41
RAPH1Q70E73 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.6■□□□□ 0.41
RAPH1Q70E73 CICP6-201ENST00000457191 2729 ntBASIC17.6■□□□□ 0.41
RAPH1Q70E73 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAPH1Q70E73 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.59■□□□□ 0.41
RAPH1Q70E73 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms