Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 ARSEP1-201ENST00000420443 635 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 LINC02560-201ENST00000596379 459 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 WIZP1-201ENST00000531444 2299 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS13CQ709C8 KRT18P32-201ENST00000424695 1287 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 CNN2P2-201ENST00000443536 909 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 CNN2P3-201ENST00000450201 906 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.44□□□□□ -0.1
VPS13CQ709C8 AL136317.3-201ENST00000618497 906 ntBASIC14.44□□□□□ -0.1
VPS13CQ709C8 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AC093010.1-201ENST00000473625 1624 ntBASIC14.43□□□□□ -0.1
VPS13CQ709C8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 LINC00982-205ENST00000420957 435 ntBASIC14.43□□□□□ -0.1
VPS13CQ709C8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AL606495.2-201ENST00000605867 535 ntBASIC14.43□□□□□ -0.1
VPS13CQ709C8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13CQ709C8 AL353135.1-201ENST00000606729 504 ntBASIC14.43□□□□□ -0.1
VPS13CQ709C8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 AL355306.1-201ENST00000415580 579 ntBASIC14.42□□□□□ -0.1
VPS13CQ709C8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13CQ709C8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS13CQ709C8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms