Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC141Q6ZP82 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.83■■□□□ 1.72
CCDC141Q6ZP82 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC141Q6ZP82 LYSMD4-203ENST00000378904 2122 ntBASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC141Q6ZP82 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 TSFM-210ENST00000550559 897 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC141Q6ZP82 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 CNN2P2-201ENST00000443536 909 ntBASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 CNN2P3-201ENST00000450201 906 ntBASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 VPS29-207ENST00000549970 818 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 AC243562.1-201ENST00000560672 389 ntBASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 AL136317.3-201ENST00000618497 906 ntBASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 AC009113.1-201ENST00000570267 2443 ntBASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 PODN-203ENST00000395871 2744 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC141Q6ZP82 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 AC005412.3-201ENST00000580309 715 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 AP001059.3-201ENST00000619053 235 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 AKAP8P1-201ENST00000434743 1349 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 TFAMP1-201ENST00000412727 736 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 FAM58DP-201ENST00000428076 619 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms