Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 AC092118.2-201ENST00000613495 667 ntBASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KCNIP4Q6PIL6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 LINC00304-203ENST00000565008 1864 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 DUSP5P2-201ENST00000426873 1033 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AL138781.1-201ENST00000566567 1274 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AC005829.2-201ENST00000571422 1056 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AC099063.4-201ENST00000641099 1602 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AC005915.1-201ENST00000624912 2018 ntBASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KCNIP4Q6PIL6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
KCNIP4Q6PIL6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms