Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 AL627223.1-201ENST00000416693 442 ntBASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 SPCS2P1-201ENST00000561636 679 ntBASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 AC025678.2-201ENST00000562061 970 ntBASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 AC004449.1-201ENST00000564240 433 ntBASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.54■■□□□ 1.52
RPGRIP1LQ68CZ1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 LYSMD4-203ENST00000378904 2122 ntBASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 FAM8A3P-201ENST00000427218 844 ntBASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC24.53■■□□□ 1.52
RPGRIP1LQ68CZ1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 AL671277.1-201ENST00000429656 993 ntBASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RPGRIP1LQ68CZ1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 KRT8P48-201ENST00000515599 1220 ntBASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 LINC00628-201ENST00000628516 1289 ntBASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.51■■□□□ 1.51
RPGRIP1LQ68CZ1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms