Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 AC128688.1-201ENST00000487626 519 ntBASIC16.9■□□□□ 0.3
RNF220Q5VTB9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 LYSMD4-203ENST00000378904 2122 ntBASIC16.9■□□□□ 0.3
RNF220Q5VTB9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF220Q5VTB9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF220Q5VTB9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF220Q5VTB9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 AC104390.1-201ENST00000555663 520 ntBASIC16.89■□□□□ 0.29
RNF220Q5VTB9 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 AC112497.1-201ENST00000624824 639 ntBASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF220Q5VTB9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms