Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 MCCD1P1-208ENST00000445732 328 ntBASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 TOB2P1-201ENST00000469761 992 ntBASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 PCDHA12-202ENST00000613593 2588 ntBASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 AC006116.8-202ENST00000587620 1550 ntBASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 AC108860.2-201ENST00000562760 2183 ntBASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRFAM7AQ494W8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 PMS2P1-201ENST00000431037 1228 ntBASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AL136038.4-201ENST00000603606 1261 ntBASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 BX640515.1-201ENST00000617215 977 ntBASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AC011270.2-201ENST00000624293 2550 ntBASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRFAM7AQ494W8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms