Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 AL353135.1-201ENST00000606729 504 ntBASIC18.57■□□□□ 0.56
USP41Q3LFD5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP41Q3LFD5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP41Q3LFD5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
USP41Q3LFD5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP41Q3LFD5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 AP002414.1-201ENST00000391405 1147 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 MRPL20P1-201ENST00000400819 433 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 PTCHD3P3-201ENST00000403073 906 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 AC010654.1-201ENST00000615722 808 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 GGTLC5P-201ENST00000617623 998 ntBASIC18.56■□□□□ 0.56
USP41Q3LFD5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP41Q3LFD5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP41Q3LFD5 AC009113.1-201ENST00000570267 2443 ntBASIC18.55■□□□□ 0.56
USP41Q3LFD5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AC211486.1-202ENST00000416371 468 ntBASIC18.55■□□□□ 0.56
USP41Q3LFD5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AC211476.1-201ENST00000503899 468 ntBASIC18.55■□□□□ 0.56
USP41Q3LFD5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AC005829.1-201ENST00000570002 483 ntBASIC18.55■□□□□ 0.56
USP41Q3LFD5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AC092865.6-201ENST00000642101 219 ntBASIC18.55■□□□□ 0.56
USP41Q3LFD5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.55■□□□□ 0.56
USP41Q3LFD5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP41Q3LFD5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 AC018845.2-201ENST00000568326 409 ntBASIC18.54■□□□□ 0.56
USP41Q3LFD5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP41Q3LFD5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.54■□□□□ 0.56
USP41Q3LFD5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms