Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 AC097374.2-201ENST00000618617 1306 ntBASIC16.88■□□□□ 0.29
HMGCS1Q01581 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 AC016396.2-201ENST00000562575 1417 ntBASIC16.87■□□□□ 0.29
HMGCS1Q01581 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 RN7SL606P-201ENST00000472779 293 ntBASIC16.87■□□□□ 0.29
HMGCS1Q01581 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 AL592071.1-201ENST00000611956 408 ntBASIC16.87■□□□□ 0.29
HMGCS1Q01581 AC124864.1-201ENST00000623408 392 ntBASIC16.87■□□□□ 0.29
HMGCS1Q01581 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HMGCS1Q01581 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCS1Q01581 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 AC007967.3-201ENST00000434308 558 ntBASIC16.86■□□□□ 0.29
HMGCS1Q01581 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 AC002558.1-201ENST00000488906 803 ntBASIC16.86■□□□□ 0.29
HMGCS1Q01581 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCS1Q01581 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCS1Q01581 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS1Q01581 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS1Q01581 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms