Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CNTNAP1P78357 AL590787.1-201ENST00000568856 1315 ntBASIC20.67■□□□□ 0.9
CNTNAP1P78357 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 AC092919.2-201ENST00000623631 1645 ntBASIC20.66■□□□□ 0.9
CNTNAP1P78357 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 TREML5P-201ENST00000421694 576 ntBASIC20.66■□□□□ 0.9
CNTNAP1P78357 U91328.1-201ENST00000437528 223 ntBASIC20.66■□□□□ 0.9
CNTNAP1P78357 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 AC112191.1-201ENST00000523689 701 ntBASIC20.66■□□□□ 0.9
CNTNAP1P78357 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP1P78357 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP1P78357 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 AC005237.2-201ENST00000434368 219 ntBASIC20.65■□□□□ 0.9
CNTNAP1P78357 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 AC140878.1-201ENST00000565277 250 ntBASIC20.65■□□□□ 0.9
CNTNAP1P78357 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 AC026120.1-201ENST00000611536 926 ntBASIC20.65■□□□□ 0.9
CNTNAP1P78357 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP1P78357 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP1P78357 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CNTNAP1P78357 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CNTNAP1P78357 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP1P78357 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 ACTG1P4-201ENST00000425123 1122 ntBASIC20.64■□□□□ 0.89
CNTNAP1P78357 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP1P78357 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTNAP1P78357 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 SLC25A6P5-201ENST00000435663 894 ntBASIC20.63■□□□□ 0.89
CNTNAP1P78357 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 GPR53P-205ENST00000457298 1084 ntBASIC20.63■□□□□ 0.89
CNTNAP1P78357 IGHV3-42-201ENST00000520410 361 ntBASIC20.63■□□□□ 0.89
CNTNAP1P78357 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms