Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS1BP61024 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS1BP61024 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CKS1BP61024 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS1BP61024 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS1BP61024 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CKS1BP61024 MTDHP1-201ENST00000605323 784 ntBASIC12.32□□□□□ -0.44
CKS1BP61024 AC069544.1-201ENST00000609399 999 ntBASIC12.32□□□□□ -0.44
CKS1BP61024 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 AL023875.1-201ENST00000640777 796 ntBASIC12.32□□□□□ -0.44
CKS1BP61024 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS1BP61024 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 AC067930.6-201ENST00000623257 4947 ntBASIC12.32□□□□□ -0.44
CKS1BP61024 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CKS1BP61024 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CKS1BP61024 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS1BP61024 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 AC004951.3-201ENST00000418645 1148 ntBASIC12.31□□□□□ -0.44
CKS1BP61024 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.31□□□□□ -0.44
CKS1BP61024 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.31□□□□□ -0.44
CKS1BP61024 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.31□□□□□ -0.44
CKS1BP61024 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.31□□□□□ -0.44
CKS1BP61024 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 HTR7P1-201ENST00000538670 1336 ntBASIC12.31□□□□□ -0.44
CKS1BP61024 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 FLJ13224-201ENST00000313737 1514 ntBASIC12.31□□□□□ -0.44
CKS1BP61024 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CKS1BP61024 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CKS1BP61024 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.31□□□□□ -0.44
CKS1BP61024 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.3□□□□□ -0.44
CKS1BP61024 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms