Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH12P55289 AC060834.1-201ENST00000443027 2032 ntBASIC16.33■□□□□ 0.2
CDH12P55289 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CDH12P55289 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 AC117947.1-201ENST00000427448 529 ntBASIC16.32■□□□□ 0.2
CDH12P55289 KRT18P48-201ENST00000434763 852 ntBASIC16.32■□□□□ 0.2
CDH12P55289 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 AC092597.1-201ENST00000487352 616 ntBASIC16.32■□□□□ 0.2
CDH12P55289 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH12P55289 AC004263.2-201ENST00000617183 678 ntBASIC16.32■□□□□ 0.2
CDH12P55289 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH12P55289 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH12P55289 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH12P55289 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH12P55289 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH12P55289 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CDH12P55289 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH12P55289 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 AC005521.1-201ENST00000393351 872 ntBASIC16.31■□□□□ 0.2
CDH12P55289 FAM8A6P-201ENST00000407496 1135 ntBASIC16.31■□□□□ 0.2
CDH12P55289 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH12P55289 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH12P55289 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH12P55289 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CDH12P55289 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
CDH12P55289 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH12P55289 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH12P55289 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms