Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.67■□□□□ 0.74
EPHB4P54760 AL645939.2-201ENST00000427340 991 ntBASIC19.67■□□□□ 0.74
EPHB4P54760 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
EPHB4P54760 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.67■□□□□ 0.74
EPHB4P54760 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.67■□□□□ 0.74
EPHB4P54760 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHB4P54760 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
EPHB4P54760 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
EPHB4P54760 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHB4P54760 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHB4P54760 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EPHB4P54760 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.66■□□□□ 0.74
EPHB4P54760 BX005266.1-201ENST00000473402 457 ntBASIC19.66■□□□□ 0.74
EPHB4P54760 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.66■□□□□ 0.74
EPHB4P54760 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.66■□□□□ 0.74
EPHB4P54760 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 AP000867.4-201ENST00000641616 219 ntBASIC19.66■□□□□ 0.74
EPHB4P54760 AC092865.6-201ENST00000642101 219 ntBASIC19.66■□□□□ 0.74
EPHB4P54760 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHB4P54760 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 AL024508.2-201ENST00000607749 1894 ntBASIC19.66■□□□□ 0.74
EPHB4P54760 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.66■□□□□ 0.74
EPHB4P54760 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
EPHB4P54760 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EPHB4P54760 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
EPHB4P54760 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHB4P54760 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHB4P54760 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
EPHB4P54760 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.65■□□□□ 0.74
EPHB4P54760 KRT18P27-201ENST00000427733 1299 ntBASIC19.65■□□□□ 0.74
EPHB4P54760 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHB4P54760 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.65■□□□□ 0.74
EPHB4P54760 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 LINC00896-202ENST00000609602 2128 ntBASIC19.65■□□□□ 0.74
EPHB4P54760 AC106028.4-201ENST00000614509 607 ntBASIC19.65■□□□□ 0.74
EPHB4P54760 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
EPHB4P54760 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.65■□□□□ 0.74
EPHB4P54760 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHB4P54760 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHB4P54760 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms