Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 AC093525.9-201ENST00000624961 1746 ntBASIC19.24■□□□□ 0.67
PMS1P54277 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.24■□□□□ 0.67
PMS1P54277 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMS1P54277 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
PMS1P54277 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
PMS1P54277 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PMS1P54277 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.23■□□□□ 0.67
PMS1P54277 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.23■□□□□ 0.67
PMS1P54277 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PMS1P54277 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.23■□□□□ 0.67
PMS1P54277 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMS1P54277 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.23■□□□□ 0.67
PMS1P54277 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 LINC02012-201ENST00000608206 1725 ntBASIC19.22■□□□□ 0.67
PMS1P54277 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.22■□□□□ 0.67
PMS1P54277 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PMS1P54277 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PMS1P54277 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.22■□□□□ 0.67
PMS1P54277 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PMS1P54277 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.22■□□□□ 0.67
PMS1P54277 FAM220CP-201ENST00000395253 831 ntBASIC19.22■□□□□ 0.67
PMS1P54277 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 TSSC2-201ENST00000450217 709 ntBASIC19.22■□□□□ 0.67
PMS1P54277 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.22■□□□□ 0.67
PMS1P54277 IGHV3-52-201ENST00000519770 353 ntBASIC19.22■□□□□ 0.67
PMS1P54277 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.22■□□□□ 0.67
PMS1P54277 TPSP2-201ENST00000561760 610 ntBASIC19.22■□□□□ 0.67
PMS1P54277 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PMS1P54277 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.22■□□□□ 0.67
PMS1P54277 AL353593.2-201ENST00000602529 1483 ntBASIC19.22■□□□□ 0.67
PMS1P54277 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMS1P54277 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PMS1P54277 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PMS1P54277 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 AC233702.3-201ENST00000578656 1387 ntBASIC19.21■□□□□ 0.67
PMS1P54277 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.21■□□□□ 0.67
PMS1P54277 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms