Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN4P51793 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.33■□□□□ 0.53
CLCN4P51793 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN4P51793 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN4P51793 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN4P51793 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN4P51793 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN4P51793 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN4P51793 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN4P51793 AP000344.2-201ENST00000512987 629 ntBASIC18.33■□□□□ 0.52
CLCN4P51793 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN4P51793 MIR3197-201ENST00000582241 73 ntBASIC18.33■□□□□ 0.52
CLCN4P51793 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN4P51793 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN4P51793 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN4P51793 AC091812.2-201ENST00000619081 385 ntBASIC18.33■□□□□ 0.52
CLCN4P51793 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN4P51793 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN4P51793 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN4P51793 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN4P51793 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN4P51793 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCN4P51793 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.32■□□□□ 0.52
CLCN4P51793 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.32■□□□□ 0.52
CLCN4P51793 ACTG1P4-201ENST00000425123 1122 ntBASIC18.32■□□□□ 0.52
CLCN4P51793 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.32■□□□□ 0.52
CLCN4P51793 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLCN4P51793 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN4P51793 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCN4P51793 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN4P51793 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCN4P51793 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCN4P51793 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 AL354751.1-201ENST00000412768 1863 ntBASIC18.31■□□□□ 0.52
CLCN4P51793 AL590787.1-201ENST00000568856 1315 ntBASIC18.31■□□□□ 0.52
CLCN4P51793 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLCN4P51793 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCN4P51793 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLCN4P51793 CXCL1P1-201ENST00000502804 216 ntBASIC18.31■□□□□ 0.52
CLCN4P51793 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.31■□□□□ 0.52
CLCN4P51793 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.31■□□□□ 0.52
CLCN4P51793 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLCN4P51793 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.31■□□□□ 0.52
CLCN4P51793 AC106028.4-201ENST00000614509 607 ntBASIC18.31■□□□□ 0.52
CLCN4P51793 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCN4P51793 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCN4P51793 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLCN4P51793 REXO1L9P-201ENST00000604264 2108 ntBASIC18.31■□□□□ 0.52
CLCN4P51793 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCN4P51793 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLCN4P51793 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 AP000997.3-201ENST00000623333 2250 ntBASIC18.3■□□□□ 0.52
CLCN4P51793 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLCN4P51793 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.3■□□□□ 0.52
CLCN4P51793 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.3■□□□□ 0.52
CLCN4P51793 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN4P51793 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLCN4P51793 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN4P51793 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms