Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CXCL5P42830 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CXCL5P42830 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.84□□□□□ -0.51
CXCL5P42830 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CXCL5P42830 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CXCL5P42830 UNC93B2-201ENST00000285383 730 ntBASIC11.84□□□□□ -0.51
CXCL5P42830 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 ABHD17AP1-201ENST00000358206 933 ntBASIC11.84□□□□□ -0.51
CXCL5P42830 AC113404.2-201ENST00000507884 177 ntBASIC11.84□□□□□ -0.51
CXCL5P42830 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.84□□□□□ -0.51
CXCL5P42830 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.84□□□□□ -0.51
CXCL5P42830 C2orf69P3-201ENST00000565542 1120 ntBASIC11.84□□□□□ -0.51
CXCL5P42830 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.84□□□□□ -0.51
CXCL5P42830 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 AC092338.2-201ENST00000568827 1415 ntBASIC11.84□□□□□ -0.51
CXCL5P42830 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CXCL5P42830 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CXCL5P42830 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.84□□□□□ -0.51
CXCL5P42830 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CXCL5P42830 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CXCL5P42830 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
CXCL5P42830 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
CXCL5P42830 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.83□□□□□ -0.52
CXCL5P42830 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.83□□□□□ -0.52
CXCL5P42830 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CXCL5P42830 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.83□□□□□ -0.52
CXCL5P42830 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CXCL5P42830 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CXCL5P42830 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 RPS2P55-201ENST00000397318 883 ntBASIC11.83□□□□□ -0.52
CXCL5P42830 AP000523.1-201ENST00000398242 1049 ntBASIC11.83□□□□□ -0.52
CXCL5P42830 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.83□□□□□ -0.52
CXCL5P42830 AC107956.1-201ENST00000494359 873 ntBASIC11.83□□□□□ -0.52
CXCL5P42830 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 CD99P1-205ENST00000527459 561 ntBASIC11.83□□□□□ -0.52
CXCL5P42830 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.83□□□□□ -0.52
CXCL5P42830 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CXCL5P42830 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.83□□□□□ -0.52
CXCL5P42830 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CXCL5P42830 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CXCL5P42830 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms