Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SNCAP37840 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 PCDHB17P-201ENST00000539533 2393 ntBASIC14.45□□□□□ -0.1
SNCAP37840 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCAP37840 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.45□□□□□ -0.1
SNCAP37840 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 AC093010.1-201ENST00000473625 1624 ntBASIC14.44□□□□□ -0.1
SNCAP37840 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 AC068418.2-201ENST00000577309 3703 ntBASIC14.44□□□□□ -0.1
SNCAP37840 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 GCSHP5-201ENST00000443090 522 ntBASIC14.44□□□□□ -0.1
SNCAP37840 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.44□□□□□ -0.1
SNCAP37840 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SNCAP37840 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.44□□□□□ -0.1
SNCAP37840 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.44□□□□□ -0.1
SNCAP37840 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNCAP37840 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 MIR718-201ENST00000390190 70 ntBASIC14.43□□□□□ -0.1
SNCAP37840 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.43□□□□□ -0.1
SNCAP37840 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.43□□□□□ -0.1
SNCAP37840 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.43□□□□□ -0.1
SNCAP37840 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.43□□□□□ -0.1
SNCAP37840 C2orf69P3-201ENST00000565542 1120 ntBASIC14.43□□□□□ -0.1
SNCAP37840 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 AL023803.3-201ENST00000615559 522 ntBASIC14.43□□□□□ -0.1
SNCAP37840 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
SNCAP37840 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.43□□□□□ -0.1
SNCAP37840 AL603756.1-201ENST00000606511 2163 ntBASIC14.43□□□□□ -0.1
SNCAP37840 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms