Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.71■□□□□ 0.43
RPA3P35244 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.71■□□□□ 0.43
RPA3P35244 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.71■□□□□ 0.43
RPA3P35244 AL136038.4-201ENST00000603606 1261 ntBASIC17.71■□□□□ 0.43
RPA3P35244 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.71■□□□□ 0.43
RPA3P35244 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.71■□□□□ 0.43
RPA3P35244 AL590326.2-201ENST00000625139 305 ntBASIC17.71■□□□□ 0.43
RPA3P35244 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.71■□□□□ 0.43
RPA3P35244 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPA3P35244 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RPA3P35244 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RPA3P35244 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.71■□□□□ 0.43
RPA3P35244 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.71■□□□□ 0.42
RPA3P35244 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RPA3P35244 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RPA3P35244 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RPA3P35244 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPA3P35244 CICP6-201ENST00000457191 2729 ntBASIC17.71■□□□□ 0.42
RPA3P35244 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
RPA3P35244 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.7■□□□□ 0.42
RPA3P35244 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.7■□□□□ 0.42
RPA3P35244 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.7■□□□□ 0.42
RPA3P35244 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPA3P35244 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.7■□□□□ 0.42
RPA3P35244 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPA3P35244 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 AL391807.1-203ENST00000604392 2365 ntBASIC17.69■□□□□ 0.42
RPA3P35244 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.69■□□□□ 0.42
RPA3P35244 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.69■□□□□ 0.42
RPA3P35244 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.69■□□□□ 0.42
RPA3P35244 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.69■□□□□ 0.42
RPA3P35244 AC092597.1-201ENST00000487352 616 ntBASIC17.69■□□□□ 0.42
RPA3P35244 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
RPA3P35244 AC079602.3-201ENST00000623931 403 ntBASIC17.69■□□□□ 0.42
RPA3P35244 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPA3P35244 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 LINC01311-201ENST00000565162 1445 ntBASIC17.69■□□□□ 0.42
RPA3P35244 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RPA3P35244 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPA3P35244 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
RPA3P35244 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.69■□□□□ 0.42
RPA3P35244 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPA3P35244 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPA3P35244 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPA3P35244 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms