Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC002347.1-201ENST00000569543 541 ntBASIC18.84■□□□□ 0.61
HOXA11P31270 AC010327.4-202ENST00000591484 748 ntBASIC18.84■□□□□ 0.61
HOXA11P31270 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
HOXA11P31270 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA11P31270 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXA11P31270 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXA11P31270 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXA11P31270 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXA11P31270 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXA11P31270 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HOXA11P31270 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA11P31270 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA11P31270 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA11P31270 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA11P31270 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOXA11P31270 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA11P31270 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA11P31270 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HOXA11P31270 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA11P31270 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXA11P31270 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA11P31270 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA11P31270 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA11P31270 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA11P31270 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXA11P31270 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 MCCD1P2-201ENST00000423228 335 ntBASIC18.81■□□□□ 0.6
HOXA11P31270 PAWRP1-201ENST00000451083 565 ntBASIC18.81■□□□□ 0.6
HOXA11P31270 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA11P31270 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA11P31270 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXA11P31270 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 AL513190.1-201ENST00000621254 727 ntBASIC18.81■□□□□ 0.6
HOXA11P31270 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA11P31270 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA11P31270 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA11P31270 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA11P31270 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA11P31270 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA11P31270 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA11P31270 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA11P31270 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXA11P31270 RHOQP3-201ENST00000437982 621 ntBASIC18.8■□□□□ 0.6
HOXA11P31270 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXA11P31270 DNAJB3-201ENST00000446806 729 ntBASIC18.8■□□□□ 0.6
HOXA11P31270 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXA11P31270 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HOXA11P31270 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA11P31270 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms