Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.53■□□□□ 0.72
CTGFP29279 AL512638.1-201ENST00000457493 794 ntBASIC19.53■□□□□ 0.72
CTGFP29279 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 AC069120.2-201ENST00000524091 540 ntBASIC19.53■□□□□ 0.72
CTGFP29279 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.53■□□□□ 0.72
CTGFP29279 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CTGFP29279 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.53■□□□□ 0.72
CTGFP29279 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTGFP29279 AC046185.3-201ENST00000623228 1824 ntBASIC19.53■□□□□ 0.72
CTGFP29279 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 AP000997.3-201ENST00000623333 2250 ntBASIC19.53■□□□□ 0.72
CTGFP29279 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CTGFP29279 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.52■□□□□ 0.72
CTGFP29279 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.52■□□□□ 0.72
CTGFP29279 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
CTGFP29279 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.52■□□□□ 0.72
CTGFP29279 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.52■□□□□ 0.72
CTGFP29279 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.52■□□□□ 0.72
CTGFP29279 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.52■□□□□ 0.72
CTGFP29279 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.52■□□□□ 0.72
CTGFP29279 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CTGFP29279 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.52■□□□□ 0.72
CTGFP29279 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTGFP29279 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.51■□□□□ 0.71
CTGFP29279 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.51■□□□□ 0.71
CTGFP29279 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 IGHV3-62-201ENST00000520057 340 ntBASIC19.51■□□□□ 0.71
CTGFP29279 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 AL359881.2-201ENST00000602973 570 ntBASIC19.51■□□□□ 0.71
CTGFP29279 MIR6080-201ENST00000617359 66 ntBASIC19.51■□□□□ 0.71
CTGFP29279 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTGFP29279 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
CTGFP29279 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTGFP29279 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 SPDYE7P-202ENST00000420373 878 ntBASIC19.5■□□□□ 0.71
CTGFP29279 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.5■□□□□ 0.71
CTGFP29279 KRT8P23-201ENST00000560090 1207 ntBASIC19.5■□□□□ 0.71
CTGFP29279 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTGFP29279 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CTGFP29279 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTGFP29279 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms