Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD40P25942 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
CD40P25942 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.08■□□□□ 0.01
CD40P25942 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CD40P25942 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.08■□□□□ 0.01
CD40P25942 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD40P25942 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CD40P25942 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD40P25942 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CD40P25942 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.08■□□□□ 0.01
CD40P25942 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.08■□□□□ 0
CD40P25942 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CD40P25942 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CD40P25942 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.08■□□□□ 0
CD40P25942 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 AC073621.1-201ENST00000392730 636 ntBASIC15.08■□□□□ 0
CD40P25942 SLC25A6P5-201ENST00000435663 894 ntBASIC15.08■□□□□ 0
CD40P25942 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.08■□□□□ 0
CD40P25942 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CD40P25942 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.08■□□□□ 0
CD40P25942 LINC01451-201ENST00000623792 534 ntBASIC15.08■□□□□ 0
CD40P25942 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.08■□□□□ 0
CD40P25942 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CD40P25942 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CD40P25942 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD40P25942 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.08■□□□□ 0
CD40P25942 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.07■□□□□ 0
CD40P25942 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.07■□□□□ 0
CD40P25942 AC097637.2-201ENST00000624096 1997 ntBASIC15.07■□□□□ 0
CD40P25942 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CD40P25942 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CD40P25942 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.07■□□□□ 0
CD40P25942 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 UNC93B6-202ENST00000528242 690 ntBASIC15.07■□□□□ 0
CD40P25942 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CD40P25942 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.07■□□□□ 0
CD40P25942 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.07■□□□□ 0
CD40P25942 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.07■□□□□ 0
CD40P25942 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.07■□□□□ 0
CD40P25942 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD40P25942 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.06■□□□□ 0
CD40P25942 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms