Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18■□□□□ 0.47
ERCC2P18074 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18■□□□□ 0.47
ERCC2P18074 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 TSPY19P-201ENST00000418461 509 ntBASIC18■□□□□ 0.47
ERCC2P18074 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 TSPY18P-201ENST00000441642 509 ntBASIC18■□□□□ 0.47
ERCC2P18074 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18■□□□□ 0.47
ERCC2P18074 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18■□□□□ 0.47
ERCC2P18074 KRT18P31-201ENST00000506277 1292 ntBASIC18■□□□□ 0.47
ERCC2P18074 STK19B-204ENST00000512515 211 ntBASIC18■□□□□ 0.47
ERCC2P18074 AL732292.2-201ENST00000609649 430 ntBASIC18■□□□□ 0.47
ERCC2P18074 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 AC106820.2-201ENST00000563775 3264 ntBASIC18■□□□□ 0.47
ERCC2P18074 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18■□□□□ 0.47
ERCC2P18074 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 AC016396.2-201ENST00000562575 1417 ntBASIC17.99■□□□□ 0.47
ERCC2P18074 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ERCC2P18074 AC003669.1-201ENST00000334569 611 ntBASIC17.99■□□□□ 0.47
ERCC2P18074 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC2P18074 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC2P18074 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC2P18074 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC2P18074 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC2P18074 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC2P18074 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 AC009336.1-201ENST00000608941 1553 ntBASIC17.99■□□□□ 0.47
ERCC2P18074 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC2P18074 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC2P18074 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC2P18074 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC2P18074 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC2P18074 KLF4P1-201ENST00000412782 1185 ntBASIC17.98■□□□□ 0.47
ERCC2P18074 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.98■□□□□ 0.47
ERCC2P18074 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC2P18074 AC091304.2-201ENST00000564639 760 ntBASIC17.98■□□□□ 0.47
ERCC2P18074 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 AP001269.4-201ENST00000609611 512 ntBASIC17.98■□□□□ 0.47
ERCC2P18074 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms