Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
PPP3CBP16298 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.74■□□□□ 0.11
PPP3CBP16298 AC091607.1-201ENST00000490318 1060 ntBASIC15.74■□□□□ 0.11
PPP3CBP16298 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.74■□□□□ 0.11
PPP3CBP16298 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.74■□□□□ 0.11
PPP3CBP16298 AC104692.2-201ENST00000603054 253 ntBASIC15.74■□□□□ 0.11
PPP3CBP16298 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 GMCL1P1-201ENST00000463439 1581 ntBASIC15.74■□□□□ 0.11
PPP3CBP16298 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.74■□□□□ 0.11
PPP3CBP16298 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PPP3CBP16298 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.73■□□□□ 0.11
PPP3CBP16298 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PPP3CBP16298 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PPP3CBP16298 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.73■□□□□ 0.11
PPP3CBP16298 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.73■□□□□ 0.11
PPP3CBP16298 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.73■□□□□ 0.11
PPP3CBP16298 AC106795.1-205ENST00000512851 1056 ntBASIC15.73■□□□□ 0.11
PPP3CBP16298 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.73■□□□□ 0.11
PPP3CBP16298 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.73■□□□□ 0.11
PPP3CBP16298 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.73■□□□□ 0.11
PPP3CBP16298 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PPP3CBP16298 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.73■□□□□ 0.11
PPP3CBP16298 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.73■□□□□ 0.11
PPP3CBP16298 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.73■□□□□ 0.11
PPP3CBP16298 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PPP3CBP16298 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 LINC00602-201ENST00000629776 2065 ntBASIC15.72■□□□□ 0.11
PPP3CBP16298 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.72■□□□□ 0.11
PPP3CBP16298 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.72■□□□□ 0.11
PPP3CBP16298 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.72■□□□□ 0.11
PPP3CBP16298 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.72■□□□□ 0.11
PPP3CBP16298 AP002469.2-201ENST00000531724 424 ntBASIC15.72■□□□□ 0.11
PPP3CBP16298 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.72■□□□□ 0.11
PPP3CBP16298 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.72■□□□□ 0.11
PPP3CBP16298 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PPP3CBP16298 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.72■□□□□ 0.11
PPP3CBP16298 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.72■□□□□ 0.11
PPP3CBP16298 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.72■□□□□ 0.11
PPP3CBP16298 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PPP3CBP16298 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms