Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CCL4P13236 AC106028.4-201ENST00000614509 607 ntBASIC16.43■□□□□ 0.22
CCL4P13236 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 AC009113.1-201ENST00000570267 2443 ntBASIC16.43■□□□□ 0.22
CCL4P13236 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.42■□□□□ 0.22
CCL4P13236 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.42■□□□□ 0.22
CCL4P13236 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.42■□□□□ 0.22
CCL4P13236 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.42■□□□□ 0.22
CCL4P13236 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.42■□□□□ 0.22
CCL4P13236 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.42■□□□□ 0.22
CCL4P13236 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.42■□□□□ 0.22
CCL4P13236 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 AC092902.6-201ENST00000641783 218 ntBASIC16.42■□□□□ 0.22
CCL4P13236 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL4P13236 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.42■□□□□ 0.22
CCL4P13236 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL4P13236 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCL4P13236 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL4P13236 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL4P13236 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL4P13236 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCL4P13236 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL4P13236 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL4P13236 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL4P13236 FAM185BP-201ENST00000443595 716 ntBASIC16.41■□□□□ 0.22
CCL4P13236 ACTG1P14-201ENST00000446382 1122 ntBASIC16.41■□□□□ 0.22
CCL4P13236 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL4P13236 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL4P13236 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.41■□□□□ 0.22
CCL4P13236 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CCL4P13236 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL4P13236 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCL4P13236 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL4P13236 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL4P13236 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms