Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COX6A1P12074 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.08■□□□□ 0.17
COX6A1P12074 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.08■□□□□ 0.16
COX6A1P12074 AC004832.2-201ENST00000426397 482 ntBASIC16.08■□□□□ 0.16
COX6A1P12074 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
COX6A1P12074 AC010327.4-202ENST00000591484 748 ntBASIC16.08■□□□□ 0.16
COX6A1P12074 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.08■□□□□ 0.16
COX6A1P12074 GGTLC5P-201ENST00000617623 998 ntBASIC16.08■□□□□ 0.16
COX6A1P12074 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
COX6A1P12074 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.08■□□□□ 0.16
COX6A1P12074 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX6A1P12074 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.08■□□□□ 0.16
COX6A1P12074 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
COX6A1P12074 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
COX6A1P12074 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COX6A1P12074 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COX6A1P12074 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COX6A1P12074 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
COX6A1P12074 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.08■□□□□ 0.16
COX6A1P12074 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
COX6A1P12074 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 LYSMD4-203ENST00000378904 2122 ntBASIC16.07■□□□□ 0.16
COX6A1P12074 AL355312.1-201ENST00000407115 2176 ntBASIC16.07■□□□□ 0.16
COX6A1P12074 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 UPF3AP3-201ENST00000420996 769 ntBASIC16.07■□□□□ 0.16
COX6A1P12074 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 GPX1P2-201ENST00000429271 606 ntBASIC16.07■□□□□ 0.16
COX6A1P12074 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.07■□□□□ 0.16
COX6A1P12074 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.07■□□□□ 0.16
COX6A1P12074 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COX6A1P12074 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX6A1P12074 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
COX6A1P12074 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.06■□□□□ 0.16
COX6A1P12074 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.06■□□□□ 0.16
COX6A1P12074 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 PI4KAP1-204ENST00000612579 1703 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COX6A1P12074 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
COX6A1P12074 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.06■□□□□ 0.16
COX6A1P12074 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
COX6A1P12074 RPSAP43-201ENST00000402237 625 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 IGLL3P-201ENST00000412472 434 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.06■□□□□ 0.16
COX6A1P12074 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.06■□□□□ 0.16
COX6A1P12074 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.06■□□□□ 0.16
COX6A1P12074 DNAJB3-201ENST00000446806 729 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 OR7E47P-204ENST00000575924 449 ntBASIC16.06■□□□□ 0.16
COX6A1P12074 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COX6A1P12074 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.06■□□□□ 0.16
COX6A1P12074 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COX6A1P12074 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.06■□□□□ 0.16
COX6A1P12074 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX6A1P12074 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms