Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CCNYL3P0C7X3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNYL3P0C7X3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.93■□□□□ 0.3
CCNYL3P0C7X3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 RNA5SP419-201ENST00000515908 135 ntBASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 AC139887.3-201ENST00000568585 713 ntBASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 AP001269.4-201ENST00000609611 512 ntBASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNYL3P0C7X3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 AC018712.1-201ENST00000455767 687 ntBASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNYL3P0C7X3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 MIR574-201ENST00000385209 96 ntBASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 KRT18P58-201ENST00000527480 1120 ntBASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNYL3P0C7X3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms