Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LINGO3P0C6S8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINGO3P0C6S8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINGO3P0C6S8 MYLKP1-201ENST00000509077 1580 ntBASIC16.98■□□□□ 0.31
LINGO3P0C6S8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AC099063.4-201ENST00000641099 1602 ntBASIC16.97■□□□□ 0.31
LINGO3P0C6S8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 LINC01023-201ENST00000606054 436 ntBASIC16.97■□□□□ 0.31
LINGO3P0C6S8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 AC036111.1-201ENST00000533973 1582 ntBASIC16.97■□□□□ 0.31
LINGO3P0C6S8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINGO3P0C6S8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 AC104640.1-201ENST00000562617 2109 ntBASIC16.96■□□□□ 0.31
LINGO3P0C6S8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 AP000593.1-201ENST00000393668 712 ntBASIC16.96■□□□□ 0.31
LINGO3P0C6S8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINGO3P0C6S8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.96■□□□□ 0.3
LINGO3P0C6S8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINGO3P0C6S8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINGO3P0C6S8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINGO3P0C6S8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
LINGO3P0C6S8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 AL512604.3-201ENST00000569583 964 ntBASIC16.95■□□□□ 0.3
LINGO3P0C6S8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.95■□□□□ 0.3
LINGO3P0C6S8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms