Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.99■□□□□ 0.95
CHGBP05060 AL773604.1-201ENST00000617417 272 ntBASIC20.99■□□□□ 0.95
CHGBP05060 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHGBP05060 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHGBP05060 AIRN-201ENST00000601203 4374 ntBASIC20.99■□□□□ 0.95
CHGBP05060 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHGBP05060 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CHGBP05060 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHGBP05060 AC108860.2-201ENST00000562760 2183 ntBASIC20.99■□□□□ 0.95
CHGBP05060 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.99■□□□□ 0.95
CHGBP05060 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHGBP05060 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHGBP05060 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.98■□□□□ 0.95
CHGBP05060 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.98■□□□□ 0.95
CHGBP05060 AC073648.2-201ENST00000510116 352 ntBASIC20.98■□□□□ 0.95
CHGBP05060 SLC25A1P1-201ENST00000528351 927 ntBASIC20.98■□□□□ 0.95
CHGBP05060 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.98■□□□□ 0.95
CHGBP05060 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.98■□□□□ 0.95
CHGBP05060 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHGBP05060 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHGBP05060 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGBP05060 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
CHGBP05060 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 AC097637.2-201ENST00000624096 1997 ntBASIC20.97■□□□□ 0.95
CHGBP05060 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CHGBP05060 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHGBP05060 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.97■□□□□ 0.95
CHGBP05060 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHGBP05060 PRYP5-201ENST00000451909 266 ntBASIC20.97■□□□□ 0.95
CHGBP05060 SCARNA2-201ENST00000458748 420 ntBASIC20.97■□□□□ 0.95
CHGBP05060 AF186996.4-201ENST00000467186 377 ntBASIC20.97■□□□□ 0.95
CHGBP05060 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.97■□□□□ 0.95
CHGBP05060 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.97■□□□□ 0.95
CHGBP05060 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGBP05060 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 AC116407.3-201ENST00000623905 1129 ntBASIC20.97■□□□□ 0.95
CHGBP05060 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 AC107918.4-202ENST00000641623 219 ntBASIC20.97■□□□□ 0.95
CHGBP05060 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CHGBP05060 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHGBP05060 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGBP05060 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHGBP05060 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGBP05060 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.96■□□□□ 0.95
CHGBP05060 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 OR7E14P-202ENST00000530490 1290 ntBASIC20.96■□□□□ 0.95
CHGBP05060 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGBP05060 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGBP05060 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.96■□□□□ 0.95
CHGBP05060 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.96■□□□□ 0.95
CHGBP05060 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHGBP05060 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms