Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ERBB2P04626 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
ERBB2P04626 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.37■□□□□ 0.53
ERBB2P04626 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.37■□□□□ 0.53
ERBB2P04626 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.37■□□□□ 0.53
ERBB2P04626 AC091304.2-201ENST00000564639 760 ntBASIC18.37■□□□□ 0.53
ERBB2P04626 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.37■□□□□ 0.53
ERBB2P04626 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.37■□□□□ 0.53
ERBB2P04626 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.37■□□□□ 0.53
ERBB2P04626 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 AC016396.2-201ENST00000562575 1417 ntBASIC18.37■□□□□ 0.53
ERBB2P04626 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.37■□□□□ 0.53
ERBB2P04626 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.37■□□□□ 0.53
ERBB2P04626 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.37■□□□□ 0.53
ERBB2P04626 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERBB2P04626 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.37■□□□□ 0.53
ERBB2P04626 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.37■□□□□ 0.53
ERBB2P04626 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ERBB2P04626 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.36■□□□□ 0.53
ERBB2P04626 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.36■□□□□ 0.53
ERBB2P04626 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 SLC25A1P3-201ENST00000395415 828 ntBASIC18.36■□□□□ 0.53
ERBB2P04626 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.36■□□□□ 0.53
ERBB2P04626 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.36■□□□□ 0.53
ERBB2P04626 SPDYE21P-201ENST00000413323 827 ntBASIC18.36■□□□□ 0.53
ERBB2P04626 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.36■□□□□ 0.53
ERBB2P04626 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.36■□□□□ 0.53
ERBB2P04626 AP005117.1-201ENST00000584346 1413 ntBASIC18.36■□□□□ 0.53
ERBB2P04626 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.36■□□□□ 0.53
ERBB2P04626 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.36■□□□□ 0.53
ERBB2P04626 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERBB2P04626 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ERBB2P04626 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 AC012313.1-201ENST00000593393 3059 ntBASIC18.35■□□□□ 0.53
ERBB2P04626 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 AKR1C7P-201ENST00000305623 895 ntBASIC18.35■□□□□ 0.53
ERBB2P04626 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.35■□□□□ 0.53
ERBB2P04626 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.35■□□□□ 0.53
ERBB2P04626 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.35■□□□□ 0.53
ERBB2P04626 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 DUSP5P1-201ENST00000441325 1139 ntBASIC18.35■□□□□ 0.53
ERBB2P04626 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ERBB2P04626 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ERBB2P04626 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
ERBB2P04626 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERBB2P04626 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERBB2P04626 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms