Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 AC099343.3-201ENST00000605834 2503 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IFNA1P01562 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IFNA1P01562 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IFNA1P01562 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 DUSP5P2-201ENST00000426873 1033 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 AC034268.1-201ENST00000441047 882 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.88□□□□□ -0.19
IFNA1P01562 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
IFNA1P01562 AC131212.4-201ENST00000623606 975 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 HLA-B-256ENST00000639848 1089 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 AC007950.2-201ENST00000615045 2347 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IFNA1P01562 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 AC092068.3-201ENST00000587894 2016 ntBASIC13.88□□□□□ -0.19
IFNA1P01562 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.88□□□□□ -0.19
IFNA1P01562 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 PCDHA3-202ENST00000532566 4594 ntBASIC13.87□□□□□ -0.19
IFNA1P01562 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.87□□□□□ -0.19
IFNA1P01562 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.87□□□□□ -0.19
IFNA1P01562 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.87□□□□□ -0.19
IFNA1P01562 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.87□□□□□ -0.19
IFNA1P01562 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.87□□□□□ -0.19
IFNA1P01562 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFNA1P01562 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
IFNA1P01562 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFNA1P01562 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms