Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ABCA1O95477 LINC01126-201ENST00000623515 1646 ntBASIC14.67□□□□□ -0.06
ABCA1O95477 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 AL022326.1-202ENST00000641533 845 ntBASIC14.67□□□□□ -0.06
ABCA1O95477 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 KRT18P28-201ENST00000453838 1332 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 AC012313.1-201ENST00000593393 3059 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 AC073621.1-201ENST00000392730 636 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 FAM8A3P-201ENST00000427218 844 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.66□□□□□ -0.06
ABCA1O95477 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCA1O95477 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCA1O95477 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ABCA1O95477 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 AC135050.7-201ENST00000624508 2218 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCA1O95477 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.66□□□□□ -0.06
ABCA1O95477 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 PRYP5-201ENST00000451909 266 ntBASIC14.66□□□□□ -0.06
ABCA1O95477 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
ABCA1O95477 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
ABCA1O95477 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCA1O95477 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCA1O95477 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ABCA1O95477 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCA1O95477 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCA1O95477 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 ESPNP-201ENST00000270691 2015 ntBASIC14.65□□□□□ -0.06
ABCA1O95477 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.65□□□□□ -0.06
ABCA1O95477 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.65□□□□□ -0.06
ABCA1O95477 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.65□□□□□ -0.06
ABCA1O95477 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.65□□□□□ -0.06
ABCA1O95477 AC108073.2-201ENST00000464002 357 ntBASIC14.65□□□□□ -0.06
ABCA1O95477 BX005266.1-201ENST00000473402 457 ntBASIC14.65□□□□□ -0.06
ABCA1O95477 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ABCA1O95477 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCA1O95477 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCA1O95477 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
ABCA1O95477 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ABCA1O95477 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCA1O95477 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms