Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNOT3O75175 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNOT3O75175 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 AKR1C7P-201ENST00000305623 895 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 NUS1P2-201ENST00000417358 873 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.02■□□□□ 0.32
CNOT3O75175 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT3O75175 FAAHP1-202ENST00000446499 1238 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 FDX1P1-201ENST00000449115 551 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 VENTXP7-201ENST00000475503 772 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.02■□□□□ 0.32
CNOT3O75175 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.02■□□□□ 0.32
CNOT3O75175 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 AC005336.2-201ENST00000593183 939 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 AC008687.5-201ENST00000593746 558 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT3O75175 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT3O75175 AC134043.2-201ENST00000624206 2238 ntBASIC17.02■□□□□ 0.32
CNOT3O75175 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.02■□□□□ 0.31
CNOT3O75175 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CNOT3O75175 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.02■□□□□ 0.31
CNOT3O75175 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT3O75175 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT3O75175 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT3O75175 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT3O75175 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CNOT3O75175 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT3O75175 KRT16P4-201ENST00000453883 522 ntBASIC17.01■□□□□ 0.31
CNOT3O75175 AC009078.2-202ENST00000463353 338 ntBASIC17.01■□□□□ 0.31
CNOT3O75175 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.01■□□□□ 0.31
CNOT3O75175 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CNOT3O75175 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CNOT3O75175 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNOT3O75175 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT3O75175 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17■□□□□ 0.31
CNOT3O75175 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17■□□□□ 0.31
CNOT3O75175 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
CNOT3O75175 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17■□□□□ 0.31
CNOT3O75175 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNOT3O75175 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17■□□□□ 0.31
CNOT3O75175 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CNOT3O75175 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CNOT3O75175 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17■□□□□ 0.31
CNOT3O75175 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT3O75175 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17■□□□□ 0.31
CNOT3O75175 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17■□□□□ 0.31
CNOT3O75175 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNOT3O75175 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNOT3O75175 ANKRD20A8P-203ENST00000641373 517 ntBASIC17■□□□□ 0.31
CNOT3O75175 CICP6-201ENST00000457191 2729 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms