Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRAF5O00463 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF5O00463 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAF5O00463 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.8■□□□□ 0.92
TRAF5O00463 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
TRAF5O00463 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 AP002414.1-201ENST00000391405 1147 ntBASIC20.8■□□□□ 0.92
TRAF5O00463 TFAMP1-201ENST00000412727 736 ntBASIC20.8■□□□□ 0.92
TRAF5O00463 ADH5P3-201ENST00000433842 1137 ntBASIC20.8■□□□□ 0.92
TRAF5O00463 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF5O00463 AC067863.1-201ENST00000494933 530 ntBASIC20.8■□□□□ 0.92
TRAF5O00463 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF5O00463 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAF5O00463 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAF5O00463 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF5O00463 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF5O00463 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 AC003669.1-201ENST00000334569 611 ntBASIC20.79■□□□□ 0.92
TRAF5O00463 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.79■□□□□ 0.92
TRAF5O00463 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.79■□□□□ 0.92
TRAF5O00463 GGTLC5P-201ENST00000617623 998 ntBASIC20.79■□□□□ 0.92
TRAF5O00463 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF5O00463 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRAF5O00463 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF5O00463 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF5O00463 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRAF5O00463 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAF5O00463 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF5O00463 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF5O00463 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF5O00463 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAF5O00463 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAF5O00463 BASP1P1-201ENST00000430708 665 ntBASIC20.78■□□□□ 0.92
TRAF5O00463 CXCL1P1-201ENST00000502804 216 ntBASIC20.78■□□□□ 0.92
TRAF5O00463 AP005018.1-201ENST00000525475 301 ntBASIC20.78■□□□□ 0.92
TRAF5O00463 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF5O00463 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRAF5O00463 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRAF5O00463 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF5O00463 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAF5O00463 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAF5O00463 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF5O00463 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF5O00463 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAF5O00463 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF5O00463 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF5O00463 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF5O00463 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.77■□□□□ 0.92
TRAF5O00463 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF5O00463 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.77■□□□□ 0.92
TRAF5O00463 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF5O00463 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms