Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC188H7C350 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC188H7C350 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 ECEL1P3-201ENST00000427961 737 ntBASIC18.2■□□□□ 0.5
CCDC188H7C350 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC188H7C350 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC188H7C350 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCDC188H7C350 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 PCDH8P1-201ENST00000428983 2773 ntBASIC18.2■□□□□ 0.5
CCDC188H7C350 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC188H7C350 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC188H7C350 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC188H7C350 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC188H7C350 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC188H7C350 AC078925.2-201ENST00000624013 1973 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC188H7C350 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 KRT18P48-201ENST00000434763 852 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC188H7C350 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC188H7C350 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC188H7C350 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC188H7C350 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 AL355075.4-201ENST00000554988 638 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 NAPSB-206ENST00000562112 1266 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC188H7C350 AC010947.1-201ENST00000623454 693 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC188H7C350 CYP2D8P-201ENST00000433633 1490 ntBASIC18.19■□□□□ 0.5
CCDC188H7C350 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CCDC188H7C350 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC188H7C350 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC188H7C350 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC188H7C350 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC188H7C350 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC188H7C350 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC188H7C350 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AL136038.4-201ENST00000603606 1261 ntBASIC18.18■□□□□ 0.5
CCDC188H7C350 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.18■□□□□ 0.5
CCDC188H7C350 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC188H7C350 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC188H7C350 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms