Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 KRT18P60-201ENST00000312876 1297 ntBASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 KRT125P-201ENST00000546827 989 ntBASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 AL033527.3-201ENST00000566366 1196 ntBASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 U85056.1-201ENST00000616429 682 ntBASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ANKRD18DP-204ENST00000455355 1975 ntBASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.71□□□□□ -0.86
CHKB-CPT1BH3BT56 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC079328.2-201ENST00000561241 3354 ntBASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms