Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 AL445228.2-201ENST00000605589 952 ntBASIC15.48■□□□□ 0.07
NPIPB4C9JG80 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 AC073592.4-201ENST00000623827 446 ntBASIC15.48■□□□□ 0.07
NPIPB4C9JG80 SIGLEC16-201ENST00000599858 1437 ntBASIC15.48■□□□□ 0.07
NPIPB4C9JG80 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB4C9JG80 HTR7P1-202ENST00000624664 4411 ntBASIC15.48■□□□□ 0.07
NPIPB4C9JG80 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB4C9JG80 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 SPDYE21P-201ENST00000413323 827 ntBASIC15.46■□□□□ 0.07
NPIPB4C9JG80 AL020989.1-201ENST00000422979 469 ntBASIC15.46■□□□□ 0.07
NPIPB4C9JG80 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 AP000867.3-201ENST00000524675 377 ntBASIC15.46■□□□□ 0.07
NPIPB4C9JG80 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPB4C9JG80 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NPIPB4C9JG80 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB4C9JG80 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB4C9JG80 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB4C9JG80 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB4C9JG80 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms