Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC004945.1-201ENST00000416738 983 ntBASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC002558.1-201ENST00000488906 803 ntBASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC011495.1-201ENST00000498085 584 ntBASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TMEM88BA6NKF7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC093484.2-201ENST00000580996 2166 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC007952.6-201ENST00000573168 2673 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC003957.1-201ENST00000625108 2673 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC009477.1-201ENST00000452936 217 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC027307.2-201ENST00000591252 911 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AC068587.10-201ENST00000641210 219 ntBASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TMEM88BA6NKF7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 SPTSSB-204ENST00000617024 1292 ntBASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM88BA6NKF7 WASH6P-202ENST00000359512 1437 ntBASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 FAM86MP-201ENST00000340703 885 ntBASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 AC092552.1-201ENST00000547243 906 ntBASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 PHGDH-209ENST00000641074 1780 ntBASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms