Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L5A6NJ08 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 AL513190.1-201ENST00000621254 727 ntBASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L5A6NJ08 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 PAWRP1-201ENST00000451083 565 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 YBX1P5-201ENST00000509441 847 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 PDPK2P-202ENST00000562415 1191 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 AC005829.1-201ENST00000570002 483 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 C20orf181-201ENST00000623918 480 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 BCL2-203ENST00000589955 5011 ntBASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L5A6NJ08 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 LYSMD4-203ENST00000378904 2122 ntBASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AP001160.2-201ENST00000596071 487 ntBASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AC004877.2-201ENST00000623941 599 ntBASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AC007064.4-201ENST00000637740 555 ntBASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 AC134684.3-201ENST00000641758 218 ntBASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L5A6NJ08 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms