Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 AL078595.1-201ENST00000404458 226 ntBASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 REXO1L3P-201ENST00000622202 1288 ntBASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SPDYE2BA6NHP3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 AL121761.2-201ENST00000598007 1648 ntBASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE2BA6NHP3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC006116.8-202ENST00000587620 1550 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AL135999.2-201ENST00000622438 1686 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 RPS6P14-201ENST00000425165 719 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 PAWRP1-201ENST00000451083 565 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC092364.2-202ENST00000597012 1073 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC022145.2-201ENST00000598203 171 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 AC022960.2-201ENST00000616300 666 ntBASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SPDYE2BA6NHP3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 TMF1P1-201ENST00000576058 373 ntBASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SPDYE2BA6NHP3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms