Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 MRPL20P1-201ENST00000400819 433 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC211486.1-202ENST00000416371 468 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC211476.1-201ENST00000503899 468 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC005829.1-201ENST00000570002 483 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AL353135.1-201ENST00000606729 504 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 GGTLC5P-201ENST00000617623 998 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC092865.6-201ENST00000642101 219 ntBASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 AP002414.1-201ENST00000391405 1147 ntBASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 AC010654.1-201ENST00000615722 808 ntBASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 AC009113.1-201ENST00000570267 2443 ntBASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3BA6NDS4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 AC138028.4-201ENST00000564984 1845 ntBASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3BA6NDS4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.71■□□□□ 0.42
TBC1D3BA6NDS4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TBC1D3BA6NDS4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.71■□□□□ 0.42
TBC1D3BA6NDS4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms