Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM5Q9Y4Y9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM5Q9Y4Y9 AC138932.3-201ENST00000567634 1902 ntBASIC19.93■□□□□ 0.78
LSM5Q9Y4Y9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LSM5Q9Y4Y9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM5Q9Y4Y9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 AC022211.4-201ENST00000625094 2161 ntBASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM5Q9Y4Y9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 AC133561.1-201ENST00000568600 2415 ntBASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
LSM5Q9Y4Y9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LSM5Q9Y4Y9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
LSM5Q9Y4Y9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM5Q9Y4Y9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM5Q9Y4Y9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM5Q9Y4Y9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSM5Q9Y4Y9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM5Q9Y4Y9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 LINC00273-201ENST00000539813 1452 ntBASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 WHAMMP3-201ENST00000611636 1609 ntBASIC19.84■□□□□ 0.77
LSM5Q9Y4Y9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSM5Q9Y4Y9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM5Q9Y4Y9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LSM5Q9Y4Y9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.83■□□□□ 0.76
LSM5Q9Y4Y9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.83■□□□□ 0.76
LSM5Q9Y4Y9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM5Q9Y4Y9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms