Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2D4Q9Y2X8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2D4Q9Y2X8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2D4Q9Y2X8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 AC138932.3-201ENST00000567634 1902 ntBASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
UBE2D4Q9Y2X8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBE2D4Q9Y2X8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 AL139125.2-201ENST00000623134 1869 ntBASIC16.83■□□□□ 0.28
UBE2D4Q9Y2X8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 AC044849.2-201ENST00000606596 710 ntBASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.82■□□□□ 0.28
UBE2D4Q9Y2X8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2D4Q9Y2X8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 AC096887.2-201ENST00000623443 1957 ntBASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2D4Q9Y2X8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2D4Q9Y2X8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UBE2D4Q9Y2X8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 AC021231.2-201ENST00000594613 730 ntBASIC16.77■□□□□ 0.28
UBE2D4Q9Y2X8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2D4Q9Y2X8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2D4Q9Y2X8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE2D4Q9Y2X8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE2D4Q9Y2X8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.77■□□□□ 0.27
UBE2D4Q9Y2X8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms