Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC026202.3-201ENST00000600805 1127 ntBASIC31.47■■■□□ 2.63
PDZRN3Q9UPQ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDZRN3Q9UPQ7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
PDZRN3Q9UPQ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.46■■■□□ 2.63
PDZRN3Q9UPQ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PDZRN3Q9UPQ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.46■■■□□ 2.63
PDZRN3Q9UPQ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PDZRN3Q9UPQ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PDZRN3Q9UPQ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.45■■■□□ 2.63
PDZRN3Q9UPQ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PDZRN3Q9UPQ7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
PDZRN3Q9UPQ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.45■■■□□ 2.62
PDZRN3Q9UPQ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
PDZRN3Q9UPQ7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PDZRN3Q9UPQ7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
PDZRN3Q9UPQ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.43■■■□□ 2.62
PDZRN3Q9UPQ7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDZRN3Q9UPQ7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDZRN3Q9UPQ7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PDZRN3Q9UPQ7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.42■■■□□ 2.62
PDZRN3Q9UPQ7 AC025884.2-201ENST00000553429 711 ntBASIC31.42■■■□□ 2.62
PDZRN3Q9UPQ7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDZRN3Q9UPQ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDZRN3Q9UPQ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDZRN3Q9UPQ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDZRN3Q9UPQ7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDZRN3Q9UPQ7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
PDZRN3Q9UPQ7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDZRN3Q9UPQ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDZRN3Q9UPQ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDZRN3Q9UPQ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 RP9P-202ENST00000450133 1212 ntBASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
PDZRN3Q9UPQ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PDZRN3Q9UPQ7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.36■■■□□ 2.61
PDZRN3Q9UPQ7 AL359258.2-201ENST00000564063 1566 ntBASIC31.36■■■□□ 2.61
PDZRN3Q9UPQ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDZRN3Q9UPQ7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDZRN3Q9UPQ7 DUX4L9-201ENST00000449051 1259 ntBASIC31.35■■■□□ 2.61
PDZRN3Q9UPQ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.34■■■□□ 2.61
PDZRN3Q9UPQ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.34■■■□□ 2.61
PDZRN3Q9UPQ7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.34■■■□□ 2.61
PDZRN3Q9UPQ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.33■■■□□ 2.61
PDZRN3Q9UPQ7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
PDZRN3Q9UPQ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.33■■■□□ 2.61
PDZRN3Q9UPQ7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
PDZRN3Q9UPQ7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PDZRN3Q9UPQ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.32■■■□□ 2.6
PDZRN3Q9UPQ7 BHLHE23-202ENST00000612929 1109 ntBASIC31.32■■■□□ 2.6
PDZRN3Q9UPQ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
PDZRN3Q9UPQ7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
PDZRN3Q9UPQ7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PDZRN3Q9UPQ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDZRN3Q9UPQ7 RAP2CP1-202ENST00000605179 643 ntBASIC31.3■■■□□ 2.6
PDZRN3Q9UPQ7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PDZRN3Q9UPQ7 AL592295.1-201ENST00000400984 884 ntBASIC31.28■■■□□ 2.6
PDZRN3Q9UPQ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.28■■■□□ 2.6
PDZRN3Q9UPQ7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDZRN3Q9UPQ7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDZRN3Q9UPQ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDZRN3Q9UPQ7 AC093536.1-201ENST00000569153 554 ntBASIC31.27■■■□□ 2.6
PDZRN3Q9UPQ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.27■■■□□ 2.6
PDZRN3Q9UPQ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PDZRN3Q9UPQ7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.26■■■□□ 2.6
PDZRN3Q9UPQ7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PDZRN3Q9UPQ7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.26■■■□□ 2.59
PDZRN3Q9UPQ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms