Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB16Q9NRJ7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB16Q9NRJ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB16Q9NRJ7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB16Q9NRJ7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L13-201ENST00000554103 1267 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L15-201ENST00000611059 1267 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L23-201ENST00000615195 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L24-201ENST00000617576 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L22-201ENST00000618238 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L20-201ENST00000619712 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L21-201ENST00000622058 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L10-201ENST00000622460 1267 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 DUX4L25-201ENST00000624915 1269 ntBASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB16Q9NRJ7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHB16Q9NRJ7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PCDHB16Q9NRJ7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB16Q9NRJ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB16Q9NRJ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB16Q9NRJ7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB16Q9NRJ7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB16Q9NRJ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB16Q9NRJ7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms